From: Sequencing genes in silico using single nucleotide polymorphisms
Haplotype | Â | Frequency | Â | Â | Â | Â | Â | Â | Â |
---|---|---|---|---|---|---|---|---|---|
Common | Variations* | Control | Case | Coef | SE | OR | 95% CI | Z-score | p-value |
KCNJ11*3 | GCCGGGGCT | 0.336 | 0.364 | Â | Â | 1 | Â | Â | Â |
KCNJ11*2 | GCTGGGGCC | 0.320 | 0.309 | -0.11 | 0.05 | 0.9 | (0.81,0.99) | -2.09 | 0.036 |
KCNJ11*1 | GCTGGGACC | 0.317 | 0.301 | -0.12 | 0.05 | 0.89 | (0.8, 0.98) | -2.29 | 0.022 |
KCNJ11*5 | GCCGCGGCT | 0.015 | 0.018 | 0.1 | 0.16 | 1.1 | (0.8, 1.52) | 0.59 | 0.558 |
Uncommon | Â | Â | Â | Â | Â | Â | Â | Â | Â |
KCNJ11*8 | GTTGGGGCC | 0.008 | 0.006 | Â | Â | Â | Â | Â | Â |
KCNJ11*4 | GCTGGCGCC | 0.0014 | 0.0005 | Â | Â | Â | Â | Â | Â |
KCNJ11*6 | GCCTGGGCT | 0.00078 | 0.001 | Â | Â | Â | Â | Â | Â |
KCNJ11*7 | CCTGGGGCC | 0.001 | 0.0003 | Â | Â | Â | Â | Â | Â |
KCNJ11*13 | GCTGGGGAC | 0.0005 | 0 | Â | Â | Â | Â | Â | Â |