Gene | Set of sequences | SNP | Position consensus | SNP type | Majority allele | Minority allele | Majority allele frequency | Minority allele frequency | PIC* |
---|---|---|---|---|---|---|---|---|---|
Asr1 | Cultivated | 1 | 621 | [T/C] | T | C | 0.56 | 0.44 | 0.49 |
Wild intron | 1 | 57 | [A/C] | A | C | 0.91 | 0.09 | 0.17 | |
2 | 68 | [T/C] | T | C | 0.88 | 0.12 | 0.21 | ||
Wild exon | 1 | 20 | [T/C] | C | T | 0.97 | 0.03 | 0.05 | |
2 | 161 | [T/C] | T | C | 0.81 | 0.19 | 0.31 | ||
3 | 233 | [T/C] | C | T | 0.84 | 0.16 | 0.27 | ||
Asr2 | Total** | 1 | 24 | [A/T] | T | A | 0.86 | 0.14 | 0.25 |
2 | 29 | [T/G] | G | T | 0.86 | 0.14 | 0.25 | ||
3 | 127 | [C/G] | C | G | 0.98 | 0.02 | 0.03 | ||
Cultivated | 1 | 6 | [A/T] | A | T | 0.93 | 0.07 | 0.12 | |
2 | 26 | [A/T] | T | A | 0.93 | 0.07 | 0.12 | ||
3 | 31 | [T/G] | G | T | 0.93 | 0.07 | 0.12 | ||
Wild | 1 | 247 | [C/G] | G | C | 0.93 | 0.07 | 0.13 | |
2 | 345 | [A/C] | C | A | 0.62 | 0.38 | 0.47 | ||
3 | 350 | [A/T] | A | T | 0.62 | 0.38 | 0.47 |