From: Linkage disequilibrium and inbreeding estimation in Spanish Churra sheep
D’ | r2 | ||||||||
---|---|---|---|---|---|---|---|---|---|
Distance | NumPairs | Average | SD | Min | Max | Average | SD | Min | Max |
< 10 Kb | 1,814 | 0.763 | 0.312 | 0.001 | 1 | 0.329 | 0.325 | 0 | 1 |
10-20 Kb | 4,218 | 0.694 | 0.322 | 0.001 | 1 | 0.256 | 0.282 | 0 | 1 |
20-40 Kb | 13,963 | 0.601 | 0.329 | 0 | 1 | 0.191 | 0.240 | 0 | 1 |
40-60 Kb | 16,364 | 0.543 | 0.323 | 0 | 1 | 0.152 | 0.207 | 0 | 1 |
60-100 Kb | 32,426 | 0.487 | 0.312 | 0 | 1 | 0.120 | 0.175 | 0 | 1 |
100-200 Kb | 80,273 | 0.422 | 0.288 | 0 | 1 | 0.086 | 0.133 | 0 | 1 |
200-500 Kb | 239,021 | 0.364 | 0.261 | 0 | 1 | 0.061 | 0.098 | 0 | 1 |
500 Kb-1 Mb | 395,047 | 0.328 | 0.243 | 0 | 1 | 0.049 | 0.078 | 0 | 0.987 |
1-2 Mb | 781,115 | 0.301 | 0.228 | 0 | 1 | 0.040 | 0.066 | 0 | 0.898 |
2-5 Mb | 2,288,329 | 0.255 | 0.203 | 0 | 1 | 0.028 | 0.048 | 0 | 0.953 |
5-10 Mb | 3,644,862 | 0.203 | 0.170 | 0 | 1 | 0.017 | 0.030 | 0 | 0.747 |
10-20 Mb | 6,661,473 | 0.158 | 0.140 | 0 | 1 | 0.009 | 0.016 | 0 | 0.661 |
20-50 Mb | 15,118,487 | 0.120 | 0.114 | 0 | 1 | 0.005 | 0.008 | 0 | 0.530 |
> 50 Mb | 13,103,982 | 0.106 | 0.106 | 0 | 1 | 0.003 | 0.006 | 0 | 0.229 |
Non-syntenic | 2,257,088 | 0.107 | 0.106 | 0 | 1 | 0.004 | 0.006 | 0 | 0.169 |