BMC Genomic Data

Table 1 European admixture estimates for admixed Bolivian samples

From: Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World

	mtDNA haplogroup	Y-chromosome haplogroup	CEU - Fraction of genome^a
	mtDNA haplogroup	Y-chromosome haplogroup	Hapmix	Admixture (3 populations, K = 3)	Admixture (5 populations, K = 5)
Admixed Bolivians
Bolivian 105	B2	R1b	0.48	0.47 ±0.02	0.41 ±0.02
Bolivian 869	A2	R1b	0.37	0.35 ±0.02	0.32 ±0.02
Bolivian 054	B2	J2	0.33	0.33 ±0.02	0.30 ±0.02
Bolivian 455	D1	Q1a3a1	0.30	0.28 ±0.02	0.24 ±0.02
Bolivian 853	B2	R1b	0.27	0.22 ±0.02	0.21 ±0.01
Bolivian 101	B2	R1b	0.25	0.23 ±0.02	0.21 ±0.01
Bolivian 817	B2	R1b	0.28	0.24 ±0.02	0.20 ±0.02
Bolivian 081	C1	Q1a3a1	0.26	0.23 ±0.02	0.23 ±0.02
Bolivian 458	B2	R1b	0.22	0.22 ±0.02	0.19 ±0.02
Bolivian 184	B2	Q1a3a1	0.13	0.05 ±0.02	0.09 ±0.02
Non-admixed Controls
Totonac 867	A2	Q1a3a1	10⁻⁵	10⁻⁵ ±10⁻¹⁶	10⁻⁵ ±10⁻¹⁶
CEU NA11993	H	−	>0.99	>0.99 ±10⁻¹⁶	>0.99 ±0.10⁻³

^aEstimated proportion of each genome attributable to European ancestry based on the CEU reference population and calculated from 815,377 SNPs (Hapmix) or 120,958 unlinked (r² ≤ 0.2) SNPs (Admixture).

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