Model | Egglib | ms | CoaSim |
---|
| Time (s) | Memory (MB) | Time (s) | Memory (MB) | Time (s) | Memory (MB) |
---|
standard | 7.68 | 48 | 1.27 | 43 | 16.67 | 80 |
recombination | 8.77 | 53 | 1.99 | 44 | 16.45 | 79 |
structured | 7.65 | 48 | 1.50 | 42 | 20.75 | 79 |
- Note: All three models (standard, recombination and structured) have 40 sequences with a fixed number of mutations of 100. 10,000 repetitions were run for each model. For the model with recombination, the scaled recombination parameter was set to 5 for all programs and the number of recombining segments was set to 1000 for eggcoal and ms (CoaSim does not require this parameter). For the structured model, 4 populations of 10 samples with a migration rate of 1 were simulated. The populations joined 10 coalescent time units in the past.