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Table 2 SNPs in the candidate genes significantly associated with mean FHB rating or DON content

From: Association of single nucleotide polymorphic sites in candidate genes with aggressiveness and deoxynivalenol production in Fusarium graminearum causing wheat head blight

Trait/Candidate gene

SNP #

Positiona

Polymorphism

Changes in amino acidsb

P-value

p G (%)c

Mean FHB rating (%)

      

   MetAP1

SNP 05

904

A, G

H, R

1.28 × 10-4

25.6

 

SNP 03

909

A, C

T, P

1.94 × 10-4

0.5

   Erf2

SNP 47

1424

C, T

Q, Stop

6.61 × 10-4

13.1

DON production (mg kg-1)

      

   TRI1

SNP 23

851

A, G

R, Q

8.62 × 10-3

4.4

  1. a The position is relative to the start codon (ATG)
  2. b Different amino acids coded by SNPs located in exon regions (non-synonymous SNPs)
  3. c The proportion of explained genotypic variance in percent (p G ) after Bonferroni-Holm procedure