|  |  |  | Chromosome 21 |  |  |  | |
---|---|---|---|---|---|---|---|---|
 | CpGPlot | CpGcluster | CpGProD | CpGIS | PSO | CPSO | GA | CGA |
Chromosome Length (bp) | Â | Â | Â | 46,944,329 | Â | Â | Â | Â |
Total length of CpG islands | 347,334 | 639,161 | 1,072,192 | 1,280,505 | 1,564,596 | 1,607,472 | 1,262,449 | 1,589,629 |
Number of islands predicted | 973 | 2,703 | 1,091 | 3,704 | 2,648 | 2,813 | 2,513 | 3,304 |
Island coverage (%) | 0.73 | 1.36 | 2.28 | 2.73 | 3.3 | 3.4 | 2.68 | 3.39 |
Island length (bp) | Â | Â | Â | Â | Â | Â | Â | Â |
Average | 357 | 237 | 983 | 346 | 591 | 571 | 502 | 482 |
Minimum | 101 | 8 | 500 | 200 | 202 | 202 | 201 | 201 |
Maximum | 3,047 | 3,028 | 6,732 | 1,948 | 4,020 | 4,035 | 6,126 | 10,687 |
GC-content ± SD (%) | 62.17 ± 0.07 | 65.49 ± 0.07 | 54.49 ± 0.06 | 57.98 ± 0.04 | 53.73 ± 0.05 | 53.72 ± 0.05 | 54.24 ± 0.05 | 55.07 ± 0.05 |
CpG island O/E ratio ± SD | 0.84 ± 0.1 | 0.87 ± 0.3 | 0.63 ± 0.1 | 0.68 ± 0.1 | 0.64 ± 0.08 | 0.65 ± 0.08 | 0.68 ± 0.1 | 0.71 ± 0.1 |
 |  |  |  | Chromosome 22 |  |  |  | |
 | CpGPlot | CpGcluster | CpGProD | CpGIS | PSO | CPSO | GA | CGA |
Chromosome Length (bp) | Â | Â | Â | 49,691,432 | Â | Â | Â | |
Total length of CpG islands | 679,803 | 522,748 | 2,067,653 | 2,842,255 | 2,802,675 | 2,907,983 | 2,251,454 | 3,085,715 |
Number of islands predicted | 1,642 | 2,186 | 1,903 | 6,875 | 4,571 | 4,882 | 3,902 | 4,985 |
Island coverage (%) | 1.36 | 1.05 | 4.16 | 5.71 | 5.64 | 5.85 | 4.53 | 6.20 |
Island length (bp) | Â | Â | Â | Â | Â | Â | Â | Â |
Average | 414 | 239 | 1,087 | 413 | 613 | 596 | 577 | 619 |
Minimum | 200 | 8 | 500 | 200 | 198 | 202 | 201 | 201 |
Maximum | 7,902 | 7,774 | 8,363 | 3,339 | 4,076 | 4,076 | 5,340 | 5,905 |
GC-content ± SD (%) | 63.70 ± 0.08 | 70.23 ± 0.08 | 55.84 ± 0.07 | 55.12 ± 0.06 | 54.50 ± 0.07 | 54.46 ± 0.07 | 55.21 ± 0.05 | 56.15 ± 0.06 |
CpG island O/E ratio ± SD | 0.84 ± 0.1 | 0.95 ± 0.3 | 0.62 ± 0.1 | 0.68 ± 0.1 | 0.63 ± 0.05 | 0.63 ± 0.05 | 0.64 ± 0.1 | 0.68 ± 0.1 |