From: Analysis of genome-wide association study data using the protein knowledge base
Mode | SNP/gene | CPS | CMP | CPS + CMP | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 | Approach | WS | MWS | MHS | HS | WS | MWS | MHS | HS | WS | MWS | MHS | HS | |
Seeded | BY | 1 Mbp | 29.14 | 6.00 | 2.29 | 0.71 | 15.43 | 3.86 | 0.71 | 0.43 | 42.86 | 9.43 | 3.00 | 1.14 |
 |  | 0.5 Mbp | 12.29 | 5.29 | 2.00 | 1.29 | 9.00 | 2.86 | 0.57 | 0.29 | 20.71 | 7.71 | 2.57 | 1.57 |
 |  | 0.1 Mbp | 6.71 | 3.00 | 1.71 | 1.00 | 3.14 | 1.00 | 0.29 | 0.00 | 9.57 | 3.57 | 1.86 | 1.00 |
 | NN | Adjacent | 19.14 | 6.00 | 1.57 | 1.43 | 6.86 | 1.57 | 0.43 | 0.00 | 25.29 | 7.00 | 1.86 | 1.43 |
 |  | Nearest | 10.86 | 2.57 | 1.43 | 1.00 | 3.00 | 0.86 | 0.29 | 0.00 | 13.71 | 3.29 | 1.57 | 1.00 |
 |  | Resident | 4.29 | 1.43 | 1.00 | 0.57 | 1.29 | 0.43 | 0.14 | 0.00 | 5.57 | 1.86 | 1.14 | 0.57 |
Ab initio | BY | 1 Mbp | 105.00 | 27.14 | 6.86 | 5.86 | 57.57 | 14.71 | 12.57 | 10.14 | 157.14 | 40.71 | 17.43 | 14.29 |
 |  | 0.5 Mbp | 41.29 | 17.43 | 5.86 | 2.86 | 30.71 | 12.71 | 8.57 | 10.43 | 70.00 | 29.57 | 14.43 | 11.86 |
 |  | 0.1 Mbp | 28.57 | 6.71 | 2.00 | 0.57 | 12.14 | 10.00 | 7.86 | 3.57 | 38.14 | 16.71 | 9.86 | 4.14 |
 | NN | Adjacent | 59.57 | 13.86 | 2.14 | 0.71 | 26.86 | 8.71 | 5.29 | 2.00 | 81.14 | 21.29 | 6.71 | 2.71 |
 |  | Nearest | 28.71 | 5.14 | 1.00 | 0.57 | 10.86 | 2.00 | 1.71 | 0.00 | 37.43 | 6.86 | 2.71 | 0.57 |
 |  | Resident | 13.00 | 2.57 | 0.29 | 0.00 | 9.71 | 0.86 | 0.57 | 0.00 | 21.00 | 3.14 | 0.86 | 0.00 |
Seeded and ab initio | BY | 1 Mbp | 105.00 | 27.14 | 6.86 | 6.57 | 72.43 | 18.43 | 13.29 | 10.57 | 170.14 | 44.00 | 18.14 | 15.43 |
 |  | 0.5 Mbp | 41.43 | 17.43 | 5.86 | 3.57 | 39.57 | 15.57 | 9.14 | 10.71 | 78.43 | 32.00 | 15.00 | 12.86 |
 |  | 0.1 Mbp | 28.57 | 7.00 | 2.29 | 1.29 | 15.29 | 11.00 | 8.14 | 3.57 | 40.57 | 17.57 | 10.29 | 4.86 |
 | NN | Adjacent | 59.57 | 13.86 | 2.29 | 1.71 | 33.43 | 10.29 | 5.71 | 2.00 | 86.57 | 22.29 | 7.14 | 3.71 |
 |  | Nearest | 28.71 | 5.29 | 1.71 | 1.14 | 13.86 | 2.86 | 2.00 | 0.00 | 39.86 | 7.57 | 3.57 | 1.14 |
 |  | Resident | 13.00 | 2.71 | 1.00 | 0.57 | 10.71 | 1.29 | 0.71 | 0.00 | 22.00 | 3.71 | 1.71 | 0.57 |