|  | Number of SNP Pairs and (%) | ||
---|---|---|---|---|
 | LD (r2) range | 0.10 | 0.25 | 0.40 |
POP1 (40 K) | 0.00-0.10 | 975 (36.97) | 1040 (38.35) | 1060 (37.80) |
 | 0.10-0.20 | 463 (17.56) | 468 (17.26) | 501 (17.87) |
 | 0.20-0.30 | 305 (11.57) | 316 (11.65) | 331 (11.80) |
 | 0.30-0.40 | 232 (8.80) | 232 (8.55) | 248 (8.84) |
 | 0.40-0.50 | 192 (7.28) | 195 (7.19) | 182 (6.49) |
 | 0.50-0.60 | 126 (4.78) | 142 (5.24) | 136 (4.85) |
 | 0.60-0.70 | 110 (4.17) | 98 (3.61) | 107 (3.82) |
 | 0.70-0.80 | 83 (3.15) | 78 (2.88) | 81 (2.89) |
 | 0.80-0.90 | 62 (2.35) | 66 (2.43) | 79 (2.82) |
 | 0.90-1.00 | 89 (3.38) | 77 (2.84) | 79 (2.82) |
 | Average LD (r2) | 0.26 | 0.25 | 0.25 |
POP2 (800 K) | 0.00-0.10 | 13980 (29.54) | 14124 (29.71) | 14939 (31.03) |
 | 0.10-0.20 | 8034 (16.98) | 7443 (15.66) | 8072 (16.77) |
 | 0.20-0.30 | 5388 (11.38) | 5442 (11.45) | 5571 (11.57) |
 | 0.30-0.40 | 4149 (8.77) | 4240 (8.92) | 4156 (8.63) |
 | 0.40-0.50 | 3250 (6.87) | 3418 (7.19) | 3321 (6.90) |
 | 0.50-0.60 | 2859 (6.04) | 2837 (5.97) | 2665 (5.54) |
 | 0.60-0.70 | 2359 (4.98) | 2479 (5.21) | 2274 (4.72) |
 | 0.70-0.80 | 1928 (4.07) | 2162 (4.55) | 2121 (4.41) |
 | 0.80-0.90 | 1929 (4.08) | 2032 (4.27) | 1924 (4.00) |
 | 0.90-1.00 | 3451 (7.29) | 3362 (7.07) | 3095 (6.43) |
 | Average LD (r2) | 0.33 | 0.33 | 0.32 |