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Table 2 Haplotype classification for the PY93 haplotype window

From: Molecular characterization of a long range haplotype affecting protein yield and mastitis susceptibility in Norwegian Red cattle

Animal

Haplotype 1 (PF)

PY (p-value)

Haplotype 2 (PF)

Effect (p-value)

1606 Frasse

PY93_C (0.137)

E (2.87-5)

PY93_C (0.137)

E (2.87-5)

1893 Rud

PY93_C (0.137)

E (2.87-5)

PY93_D (0.070)

-

2005 Smidesang

PY93_C (0.137)

E (2.87-5)

PY93_B (0.146)

R (5.35-13)

2636 Vik

PY93_B (0.146)

R (5.35-13)

PY93_E (0.025)

-

3454 J. Steinsvik

PY93_A (0.197)

-

PY93_E (0.025)

-

  1. Haplotype 1 and haplotype 2 are given for NRC animals 1606 Frasse, 1893 Rud, 2005 Smidesang, 2636 Vik and 3454 J. Steinsvik for the PY93 haplotype window. Population frequencies (PF) were found based on phased chromosomes of 2601 NRC animals. Elevated (E) or reduced (R) protein yield (PY) is indicated when found significantly differing from the population mean (p-value < 0.01).