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Table 4 Associations of common haplotypes compared with a reference haplotype

From: MCP1 haplotypes associated with protection from pulmonary tuberculosis

Haplotype

 

cases

controls

OR

CI

P

-2582

-362

Del

n (frequency)

n (frequency)

   

A

G

W

2281 (0.57)

2456 (0.52)

1

  

G

C

D

677(0.17)

928 (0.20)

0.78

[0.69-0.87]

0.00002

A

C

D

881(0.22)

1089 (0.23

0.87

[0.78-0.96]

0.008

A

C

W

142(0.04)

179 (0.04)

0.84

[0.67-1.07]

0.15

  1. Del, intronic 14 bp deletion int1del554-567 OR, odds ratio; CI, 95% confidence interval.
  2. OR and P values refer to comparisons with the reference haplotype A/G/W.
  3. W, wildtype; D, deletion; global adjusted P value 0.0028
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BMC Genomic Data

ISSN: 2730-6844

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