Table 2 The rate of Mendelian inconsistencies in offsprings' CNVs of HapMap trio data
From: Comparative analysis of copy number variation detection methods and database construction
Programs | Overlap > 0% | > 50% | > 80% |
|---|---|---|---|
PennCNV | 0.190 | 0.192 | 0.197 |
Birdsuite:Birdseye/Canary | 0.028/0.015 | 0.030/0.015 | 0.030/0.015 |
DNAcopy | 0.531 | 0.579 | 0.583 |
CGHseg | 0.417 | 0.462 | 0.493 |