A new mapping method for quantitative trait loci of silkworm

BMC Genomic Data

Table 2 Estimation of QTL positions and main effects with Models I, II and III ^a

QTL^b	Chr.	Pos.				A				D				Power
		Par.	Est.( SD )			Par.	Est.( SD )			Par.	Est.( SD )
			I	II	III		I	II	III		I	II	III	I	II	III
Q1	1	44	44.02 (3.14)	44.07 (3.43)	44.02 (3.14)	3.88	3.88 (0.38)	3.92 (0.52)	3.91 (0.43)	-2.3	-2.21 (0.53)	-2.27 (0.73)	-2.22 (0.60)	96.7	93.3	96.7
Q2	2	45	45.20 (4.09)	45.36 (5.40)	45.20 (4.09)	-2.4	-2.43 (0.42)	-2.48 (0.54)	-2.48 (0.48)	1.9	1.80 (0.51)	1.83 (0.76)	1.84 (0.61)	91	84.3	91
Q3	3	50	50.18 (2.13)	50.21 (3.27)	50.18 (2.13)	3.2	3.25 (0.38)	3.29 (0.48)	3.33 (0.44)	2.1	2.05 (0.52)	2.13 (0.74)	2.09 (0.61)	98.3	94.7	98.3
Q4	4	73	73.24 (4.23)	73.29 (5.77)	73.24 (4.23)	-2.8	-2.67 (0.41)	-2.74 (0.50)	-2.71 (0.44)	-1.9	-1.84 (0.53)	-1.87 (0.73)	-1.85 (0.60)	92	87.7	92
Q5	5	15	15.28 (6.40)	16.52 (7.94)	15.28 (6.40)	1.9	1.98 (0.36)	2.17 (0.52)	2.13 (0.42)	0	-0.01 (0.55)	-0.09 (0.85)	-0.08 (0.67)	62.7	49.7	62.7
Q6	2	75	-	-	-	0	-	-	-	0	-	-	-	-	-	-
Q7	4	24	-	-	-	0	-	-	-	0	-	-	-	-	-	-

^a Pos. (position): the distance (cM) between the QTL and the first marker on the same chromosome; A: additive effect; D: dominance effect; Chr. (chromosome): the chromosome on which the QTL is located; Power: the percentage of the QTL that is detected correctly to be significant at 0.05 and within the 95% confidence interval; Par. (parameter): the true parameter value in simulations; Est.: the estimate of parameter; SD: the standard deviation of the estimate from the true value that is listed in the parenthesis where applicable; I (Model I): model (1) (silkworm F₂ model); II (Model II): the normal chiasmate F₂ model; III(Model III): the reduced version of model (1) without all epistatic effects and their interaction effects with sex.
^b Q6 and Q7 are two QTLs without main effects, and thus could not been detected by the model of QTL main effects.

ISSN: 2730-6844