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Table 3 Sets of assigned paralogous markers

From: An annotated genetic map of loblolly pine based on microsatellite and cDNA markers

Marker Paralog set No. LG cM positiona GenBank accession UniGene cluster ID of set members
PitaIFG_2361_1 1 10 102 H75090 Pta.1807
PtIFG_2361_2 1 7 81 H75090  
PitaIFG_1A7_6 2 10 112 AI812330 Pta.2426
PtIFG_1A7_A 2 2 33 AI812330  
PtSIFG_0206 2 1 98 DR160521  
PtIFG_2530_A 3 4 43 H75202 Pta.11556
PtIFG_2588_1 3 3 86 H75218  
PtIFG_653_d 4 1 2 H75097 Pta.1755
PtIFG_653_2 4 12 89 H75097  
PtIFG_653_3 4 11 81 H75097  
PtIFG_3012_2 5 12 87 H75261 Pta.1533
PtIFG_3012_3 5 2 3 H75262  
PtIFG_2393_1 6 1 102 H75095 Pta.18383
estPtIFG_2615_a 6 11 37 CO170994  
PtIFG_149_A 7 7 128 H75140 Pta.1913
PtIFG_149_2 7 8 132 H75141  
estPtIFG_149_a 7 7 0 H75140  
PtIFG_2220_A 8 5 90 DT626617 Pta.19510
PtIFG_2220_B 8 4 124 DT626617  
PtIFG_2145_76 9 3 9 H75056 Pta.2729
PtIFG_2145_1 9 3 115 H75056  
PtIFG_2145_28 9 10 31 H75056  
PtIFG_2145_3 9 4 0 H75056  
PtIFG_1916_1 10 11 48 H75030 Pta.2960
PtIFG_1916_2 10 7 60 H75030  
PtIFG_1916_4 10 8 63 H75030  
PtIFG_1636_2 11 4 111 H75187 Pta.478
PtIFG_1636_3 11 3 68 H75187  
PtIFG_1636_54 11 3 55 H75187  
PthCAB 12 1 19 X13407 Pta.4922
PtIFG_2006_C 12 3 120 H75042  
PtIFG_2718_1 13 3 31 H75230 Pta.4966
PtIFG_2718_2 13 4 78 H75230  
PtIFG_2718_3 13 3 74 H75230  
PtIFG_2574_c 14 5 99 H75217 Pta.575
PtIFG_2574_2 14 5 107 H75216  
estPtIFG_1934_a 14 3 120 DR095068  
PtIFG_2564_A 15 2 33 H75212 Pta.594
PtIFG_2564_B 15 4 52 H75213  
PsyGPD 16 5 57 L26923 Pta.598
PtIFG_1165_a 16 2 112 H75179  
PtIFG_2068_A 16 3 112 H75130  
PtIFG_2538_B 16 2 23 H75204  
PtIFG_2538_5 16 8 131 H75205  
estPtIFG_1950_a 16 6 59 H75126  
PtIFG_1918_A 17 6 42 H75102 Pta.84
PtIFG_1918_f 17 10 37 H75102  
PtIFG_1918_h 17 2 75 H75102  
PtIFG_1918_3 17 3 54 H75111  
PtIFG_975_3 17 3 109 H75119 Pta.9520
PtIFG_975_4 17 4 6 H75119  
PtIFG_138_A 19 5 102 H75134 Pta.11535
PtIFG_138_B 19 3 95 H75135  
PtIFG_2090_1 20 6 77 H75048 Pta.6038
PtIFG_2090_2 20 3 50 H75048  
PtIFG_2090_4 20 5 26 H75048  
PtIFG_2022_A 21 5 54 H75128 Pta.11545
PtIFG_2113_1 21 4 27 H75052  
  1. a Map position in LG from round-3 JOINMAP integrated mapping calculations.