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Table 2 Marker pairs with redundancy for a locus

From: An annotated genetic map of loblolly pine based on microsatellite and cDNA markers

Redundant marker GenBank accession UniSTS ID Cita Mapped marker LG Evidenceb
estPtIFG_0066_a H75018 n/a [13] PtIFG_66_1 2 B
estPtIFG_0606_a n/a n/a [13] PtIFG_606_1 6 B
estPtIFG_1165_a H75179 n/a [13] estPtIFG_1950_a 6 A
estPtIFG_1635_a H75110 n/a [13] PtIFG_1635_A 10 B
estPtIFG_2009_a n/a n/a [13] PtIFG_2009_A 6 B
estPtIFG_2253_a H75063 n/a [13] PtIFG_2253_A 1 B
estPtIFG_2610E(S) H75220 n/a [13] estPtIFG_1950_a 6 A
estPtIFG_8496_a AA739536 516058 [14] estPtIFG_9198_a 1 A
estPtIFG_8596_a AA739594 516051 [14] estPtIFG_9092_a 5 A
estPtIFG_8843_a AA739759 516049 [12] estPtIFG_9053_a 1 A
estPtIFG_8907_a AA739797 516254 [13] PtSIFG_0219 8 A
estPtIFG_AGP-3 n/a n/a [12] SsrPt_ctg7444 9 C
estPtNCS_20G2_a AI812850 n/a [12] estPtIFG_9053_a 1 A
estPtNCS_6C12F_a AA556811 516381 [14] PpSIFG_3145 3 C
PtIFG_1576_1 n/a n/a [11] estPtIFG_1576_a 1 B
PtIFG_1635_C H75110 n/a [11] PtIFG_1635_A 10 B
PtIFG_1A2_1 n/a n/a [11] PtIFG_1A2_C 4 B
PtIFG_2145_5 H75056 n/a [18] PtIFG_2145_76 3 B
PtIFG_2146_31 n/a n/a [11] PtIFG_2146_2 2 B
PtIFG_2540_2 H75131 n/a [11] estPtIFG_0893_a 5 A
PtIFG_2610_A H75221 n/a [11] estPtIFG_1950_a 6 A
PtIFG_2889_21 H75234 n/a [11] estPtIFG_2889_a 3 B
PtIFG_2931_b H75250 n/a [11] PtIFG_2931_A 1 B
PtTX3118 AF277845 508481 [40] PtSIFG_1325 2 C
SsrPt_AA739797 AA739797 516382 [27] PtSIFG_0219 8 A
SsrPt_ctg4487a DR159792 n/a [27] SsrPt_ctg7141 3 A
SsrPt_ctg4487b DR159792 516389 [27] SsrPt_ctg7141 3 A
SsrPt_ctg4698 BG275886 516390 [27] PtSIFG_1325 2 A
  1. n/a = not available.
  2. a The citation in which the redundant marker was first reported. Additional file 2 lists the citations, GenBank accession numbers, and UniSTS IDs of the mapped markers.
  3. b Evidence for assignment of redundant status: all markers mapped within 3 cM of each other, "A" denotes marker pairs assigned to the same UniGene, "B" denotes marker pairs derived from the same DNA clone, "C" denotes marker pair sequences with a BLASTn E-value less than 4 × 10-43.