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Table 3 β-actin, rpl8 and gapdh P and A allele-specific transcripts detected in liver and kidney cells of individuals from Almargem, Guadiana and Tejo populations of the S. alburnoides complex

From: Ploidy mosaicism and allele-specific gene expression differences in the allopolyploid Squalius alburnoides

Code River Basin River site Ploidy Genotype1 Liver expression Kidney expression
      β -actin rpl8 gapdh β -actin rpl8 gapdh
Sq22 Guadiana Murtega 2n AA A A A A A A
Sq23 Guadiana Murtega 2n AA A A A A A A
Sq1 Almargem Almargem 2n AA A A A A A A
Sq3 Almargem Almargem 2n PP P P P P P P
Sq4 Almargem Almargem 2n PP P P P P P P
Sq5 Almargem Almargem 2n PP P P P P P P
Sq27 Guadiana Murtega 2n PA PA PA PA PA PA PA
Sq8 Almargem Almargem 2n PA PA PA PA PA PA PA
Sq29 Guadiana Foupana 3n/3n PAA PA/PA PA/PA PA/PA PA/PA PA/PA PA/PA
Sq31 Guadiana Caia 3n/3n PAA PA/PA PA/PA PA/PA PA/PA PA/PA PA/PA
Sq9 Almargem Almargem 3n PAA PA PA A PA PA A
Sq13 Almargem Almargem 3n PAA PA PA PA PA PA PA
Sq14 Almargem Almargem 3n PAA A PA PA PA PA PA
Sq18 Almargem Almargem 3n/3n PAA PA/PA PA/PA PA/PA PA/PA PA/PA PA/PA
Sq16 Almargem Almargem 3n/2n PAA/AA PA/A PA/A PA/A PA/A PA/A PA/A
Sq38 Tejo Sorraia 3n PPA PA PA PA PA PA PA
Sq40 Tejo Sorraia 3n PAA PA PA PA PA PA A
Sq36 Tejo Ocreza 3n PPA PA PA PA PA PA PA
Sq37 Tejo Ocreza 3n PPA PA PA PA PA PA PA
Sq33 Tejo Ocreza 3n PAA PA PA PA PA PA A
  1. 1DNA extracted from liver cells