Ploidy mosaicism and allele-specific gene expression differences in the allopolyploid Squalius alburnoides

BMC Genomic Data

Table 1 Specimens' genotype, river basin, stream of capture and ploidy status in liver, kidney and blood

Genotype¹	Code	Basin	Stream	Liver		Kidney		Blood
				A_L	B_L	A_K	B_K	A_B
AA	Sq1	Almargem	Almargem	2n	2n	2n	2n	2n
	Sq22;
AA	Sq23	Guadiana	Murtega	2n	2n	2n	2n	2n
PA	Sq6²	Almargem	Almargem	3n	2n	2n/3n	3n	2n
PA	Sq7; Sq8	Almargem	Almargem	2n	2n	2n	2n	2n
	Sq24;
PA	Sq25;	Guadiana	Foupana	2n	2n	2n	2n	2n
	Sq26
PA	Sq27	Guadiana	Murtega	2n	2n	2n	2n	2n
PA	Sq32	Tejo	Ocreza	2n	2n	2n	2n	2n
	Sq12;
	Sq13;
	Sq14;
	Sq15;
PAA	Sq17;	Almargem	Almargem	3n	3n	3n	3n	3n
	Sq18;
	Sq19;
	Sq20;
	Sq21
PAA	Sq11²	Almargem	Almargem	3n	2n	2n/3n	3n	3n
PAA	Sq16²	Almargem	Almargem	3n	2n	3n	2n	2n/3n
PAA	Sq28;	Guadiana	Murtega	3n	3n	3n	3n	3n
	Sq29
PAA	Sq30²	Guadiana	Caia	3n	2n	3n	2n	3n
PAA	Sq31	Guadiana	Caia	3n	3n	3n	3n	3n
	Sq33;
PAA	Sq34;	Tejo	Ocreza	3n	3n	3n	3n	3n
	Sq35
	Sq39;
PAA	Sq40	Tejo	Sorraia	3n	3n	3n	3n	3n
PP	Sq2; Sq3;	Almargem	Almargem	2n	2n	2n	2n	2n
	Sq4; Sq5
	Sq36;
PPA	Sq37	Tejo	Ocreza	3n	3n	3n	3n	3n
PPA	Sq38	Tejo	Sorraia	3n	3n	3n	3n	3n

¹Genotyping from DNA extracted from fin clips
²Ploidy mosaic specimen
A_L and B_L defined cell dot regions in liver; A_K and B_K cell dot regions in kidney

ISSN: 2730-6844