Effect of family relatedness on characteristics of estimated IBD probabilities in relation to precision of QTL estimates

Table 1 Mean ± standard deviation of IBD probability for all family structures at 0 cM and at the true QTL position for marker maps M1, M2, M3 and M4 and six marker alleles

	M1	M2	M3	M4
at 0 cM being the most distant position to the true QTL position:
FS0	0.0153 ± 0.0099	0.0155 ± 0.00994	0.0153 ± 0.00987	0.0133 ± 0.0099
FS1	0.0175 ± 0.0116	0.0176 ± 0.0116	0.0175 ± 0.0116	0.0172 ± 0.0116
FS3	0.0192 ± 0.0124	0.0193 ± 0.0116	0.0192 ± 0.0124	0.0187 ± 0.0124
FS3a	0.0223 ± 0.0164	0.0224 ± 0.0166	0.0198 ± 0.0126	0.0206 ± 0.0133
FS3b	0.0205 ± 0.0128	0.0140 ± 0.0112	0.0152 ± 0.0113	0.0252 ± 0.0165
FS4	0.0198 ± 0.0133	0.0212 ± 0.0139	0.0208 ± 0.0135	0.0227 ± 0.0154
FS5	0.0185 ± 0.0136	0.0196 ± 0.0132	0.0181 ± 0.0129	0.0188 ± 0.0089
FS88	0.0407 ± 0.0283	0.0367 ± 0.0220	0.0328 ± 0.0186	0.0379 ± 0.0230
FS99	0.30261 ± 0.0648	0.2785 ± 0.0768	0.3485 ± 0.1015	0.3081 ± 0.1154
at the true QTL position:
FS0	0.0128 ± 0.0106	0.0127 ± 0.0095	0.0127 ± 0.0104	0.0127 ± 0.0104
FS1	0.0170 ± 0.0127	0.0176 ± 0.0127	0.0170 ± 0.0122	0.0170 ± 0.0122
FS3	0.0192 ± 0.0136	0.0191 ± 0.0122	0.0189 ± 0.0132	0.0189 ± 0.0132
FS3a	0.0223 ± 0.0177	0.0224 ± 0.0174	0.0191 ± 0.0169	0.0182 ± 0.0140
FS3b	0.0222 ± 0.0156	0.0142 ± 0.0101	0.0149 ± 0.0126	0.0210 ± 0.0142
FS4	0.0218 ± 0.0159	0.0219 ± 0.0155	0.0200 ± 0.0165	0.0234 ± 0.0151
FS5	0.0214 ± 0.0154	0.0218 ± 0.0137	0.0213 ± 0.0143	0.0179 ± 0.0137
FS88	0.0414 ± 0.0277	0.0369 ± 0.0234	0.0287 ± 0.0227	0.0410 ± 0.0286
FS99	0.2881 ± 0.0919	0.2853 ± 0.0884	0.3392 ± 0.0993	0.3256 ± 0.0994

ISSN: 2730-6844