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Table 6 Information concerning the markers used

From: Population structure and genetic bottleneck in sweet cherry estimated with SSRs and the gametophytic self-incompatibility locus

Marker name

Linkage group

Repeat motif

Reference

UDP96005

1

(AC)16TG(CT)2CA(CT)11

[54]

EMPA002

1

(AG)13

[55]

EMPA003

1

(AC)8

[55]

EMPA005

1

(CT)3CAT(CT)12T(AC)23

[55]

PCHGMS1

2

(AC)12(AT)6

[56]

PCEGA34

2

NA

[57]

UDP98411

2

(TC)16

[58]

BPPCT034

2

(GA)19

[46]

EMPA017

2

(AG)19

[55]

EMPaS02

3

(TTG)7ctgc(TG)10(AG)8

[59]

EMPaS12

3

(TG)10a/GA)10aa(GA)13

[59]

PS12A02

4

NA

[60]

BPPCT040

4

(GA)14

[46]

EMPaS06

4

(CT)12

[59]

EMPaS10

4

(GA)28

[59]

EMPaS11

5

(TC)25

[59]

EMPaS14

5

(TC)10ccat(TC)5ccat(TC)8

[59]

UDP96001

6

(CA)17

[54]

UDP98021

6

(GA)22(CA)11

[58]

UDP98412

6

(AG)28

[58]

EMPA004

6

(GA)4AA(GA)4AA(GA)15

[55]

EMPaS01

6

(GA)9(GA)11

[59]

UCDCH14

7

(CT)18

[30]

UDP98409

8

(AG)19

[54]

EMPA018

8

(GA)18

[55]

EMPA026

8

complex (CT)

[61]

  1. Linkage group position is given based on information published for a cherry map (inter-specific cross Prunus avium 'Napoleon' × P. nipponica), except for BPCCT034 for which the position is given based on a work published on another cherry map [61, 62].
  2. The repeat motif of each marker is given based on information provided, or not, by the original reference that published primers for the marker.