From: Vietnamese chickens: a gate towards Asian genetic diversity
Breed names | Code | Province | Country | Ni | Number of haplotypes | h | π | Haplogroups (%) | Nb of haplogroups | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | B | C | D | E | F | G | |||||||||
Beijing Youkei | BY | Beijing | China | 4 | 3 | 0.83 | 0.006 | 75 | 25 | 0 | 0 | 0 | 0 | 0 | 2 |
Huxu | HX | Guangdong | China | 5 | 1 | 0.00 | 0.000 | 0 | 0 | 100 | 0 | 0 | 0 | 0 | 1 |
Qinyuan blotted | QY | Guangdong | China | 10 | 3 | 0.60 | 0.011 | 0 | 33 | 67 | 0 | 0 | 0 | 0 | 2 |
Luke | LK | Guanxi | China | 9 | 4 | 0.81 | 0.013 | 44 | 22 | 33 | 0 | 0 | 0 | 0 | 3 |
Wanfeng Wugu | Wangf | Guanxi | China | 9 | 5 | 0.81 | 0.016 | 44 | 11 | 11 | 0 | 0 | 11 | 22 | 5 |
Dwarf Wugu | Dwarf | Guizhou | China | 10 | 5 | 0.86 | 0.012 | 27 | 27 | 0 | 0 | 45 | 0 | 0 | 3 |
Guizhou Moutain Wugu | Wguiz | Guizhou | China | 10 | 5 | 0.76 | 0.012 | 64 | 0 | 18 | 0 | 27 | 0 | 0 | 3 |
Heikang Layer | HK | Guizhou | China | 5 | 2 | 0.60 | 0.013 | 60 | 0 | 40 | 0 | 0 | 0 | 0 | 2 |
Wumeng Wugu | WM | Guizhou | China | 4 | 2 | 0.67 | 0.003 | 0 | 100 | 0 | 0 | 0 | 0 | 0 | 1 |
Gushi Wugu | Wgus | Henan | China | 11 | 6 | 0.89 | 0.012 | 42 | 8 | 0 | 0 | 42 | 0 | 8 | 4 |
Henan Cockfight | DJ | Henan | China | 4 | 1 | 0.00 | 0.000 | 25 | 58 | 0 | 0 | 17 | 0 | 0 | 3 |
Taihe Silky | SY | Henan | China | 14 | 3 | 0.65 | 0.010 | 36 | 50 | 14 | 0 | 0 | 0 | 0 | 3 |
Black Silky hubei | HBHF | Hubei | China | 10 | 3 | 0.60 | 0.005 | 40 | 60 | 0 | 0 | 0 | 0 | 0 | 2 |
Silky hybrid | KD | Hubei | China | 3 | 2 | 0.67 | 0.009 | 33 | 67 | 0 | 0 | 0 | 0 | 0 | 2 |
Silky hubei | HBBF | Hubei | China | 11 | 3 | 0.69 | 0.011 | 36 | 45 | 18 | 0 | 0 | 0 | 0 | 3 |
Yunxian Wugu | Y | Hubei | China | 10 | 5 | 0.87 | 0.014 | 20 | 30 | 50 | 0 | 0 | 0 | 0 | 3 |
Xuefeng | XF | Hunan | China | 8 | 4 | 0.64 | 0.008 | 0 | 75 | 13 | 0 | 13 | 0 | 0 | 3 |
Langshan | RS | Jiangsu | China | 4 | 1 | 0.00 | 0.000 | 0 | 100 | 0 | 0 | 0 | 0 | 0 | 1 |
Silky Jiangsu | JSW | Jiangsu | China | 13 | 6 | 0.85 | 0.013 | 38 | 23 | 31 | 0 | 0 | 8 | 0 | 4 |
Yugan wugu | YG | Jiangxi | China | 4 | 4 | 1.00 | 0.015 | 25 | 25 | 0 | 0 | 50 | 0 | 0 | 3 |
Bigbone | DG | Liaoning | China | 4 | 2 | 0.50 | 0.005 | 25 | 75 | 0 | 0 | 0 | 0 | 0 | 2 |
Souguang | SG | Shangdong | China | 4 | 3 | 0.83 | 0.007 | 25 | 75 | 0 | 0 | 0 | 0 | 0 | 2 |
Caoke | Caoke | Sichuan | China | 16 | 6 | 0.62 | 0.004 | 94 | 0 | 0 | 0 | 6 | 0 | 0 | 2 |
Chengdu Black Silky | ChenBlaSil | Sichuan | China | 9 | 5 | 0.81 | 0.010 | 44 | 44 | 0 | 0 | 0 | 0 | 11 | 3 |
Chengdu Silky | ChenSil | Sichuan | China | 6 | 4 | 0.71 | 0.004 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
SichuanMountain Wugu | sdw | Sichuan | China | 11 | 6 | 0.87 | 0.012 | 25 | 8 | 25 | 0 | 42 | 0 | 0 | 4 |
Ya'an Non Wugu | YH | Sichuan | China | 7 | 3 | 0.67 | 0.002 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Ya'an Wugu | YW | Sichuan | China | 10 | 8 | 0.87 | 0.010 | 44 | 22 | 11 | 0 | 22 | 0 | 0 | 4 |
Tibetan | ZJ | Tibetan | China | 4 | 1 | 0.00 | 0.000 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Chahua | Chahua | Yunnan | China | 16 | 8 | 0.87 | 0.008 | 42 | 56 | 0 | 0 | 2 | 0 | 0 | 3 |
Chigulu | Chig | Yunnan | China | 19 | 7 | 0.78 | 0.015 | 27 | 33 | 0 | 9 | 0 | 9 | 21 | 5 |
Douji | Douji | Yunnan | China | 9 | 5 | 0.72 | 0.010 | 11 | 72 | 0 | 0 | 6 | 6 | 6 | 5 |
Jiangbian | Jiang | Yunnan | China | 28 | 11 | 0.85 | 0.013 | 14 | 0 | 0 | 0 | 4 | 43 | 39 | 4 |
Lv'erwu | Lerv | Yunnan | China | 29 | 13 | 0.92 | 0.017 | 24 | 14 | 3 | 0 | 10 | 17 | 31 | 6 |
Nixi | NX | Yunnan | China | 9 | 8 | 0.97 | 0.015 | 9 | 7 | 0 | 0 | 2 | 32 | 50 | 5 |
Shenggou | Sheng | Yunnan | China | 3 | 2 | 0.67 | 0.019 | 50 | 0 | 0 | 0 | 0 | 50 | 0 | 2 |
Tenchongxue | Teng | Yunnan | China | 45 | 15 | 0.88 | 0.016 | 32 | 7 | 0 | 0 | 5 | 50 | 7 | 5 |
Whenshanshandi | When | Yunnan | China | 35 | 12 | 0.89 | 0.015 | 31 | 28 | 3 | 0 | 0 | 14 | 25 | 5 |
Wuding | WD | Yunnan | China | 7 | 4 | 0.81 | 0.010 | 29 | 57 | 0 | 0 | 0 | 0 | 14 | 3 |
Yanjing Wugu | YJ | Yunnan | China | 8 | 7 | 0.96 | 0.015 | 13 | 13 | 13 | 0 | 0 | 0 | 63 | 4 |
HG population | HG | Ha Giang | Vietnam | 106 | 25 | 0.86 | 0.013 | 21 | 53 | 5 | 2 | 0 | 13 | 6 | 6 |
G. g. jabouillei | 3 | 3 | 33 | 0 | 0 | 33 | 0 | 33 | 0 | 3 | |||||
G. g. spadiceus | (Genbank + Gg1) | 47 | 13 | 15 | 38 | 0 | 23 | 0 | 11 | 0 | 5* | ||||
G. g. gallus | (Genbank + Gg2 + Gg3) | 46 | 19 | 4 | 26 | 0 | 22 | 2 | 11 | 15 | 8* |