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Table 5 Type I error for genotypic test with low minor allele frequencies (MAF).

From: An entropy test for single-locus genetic association analysis

 

Expected

CG

GE i

MAF = 0.01

   
 

0.05

0.022

0.019

 

0.01

0.000

0.000

MAF = 0.03

   
 

0.05

0.044

0.052

 

0.01

0.008

0.013

MAF = 0.06

   
 

0.05

0.057

0.062

 

0.01

0.013

0.013

  1. CG = Conventional genotypic test. GE = Entropy genotypic test.