From: Regional differences in recombination hotspots between two chicken populations
Population 1 | Population 2 | ||||||||
---|---|---|---|---|---|---|---|---|---|
Chromosome | Length1 | Sex-average | Sex-specific | Sex-specific | |||||
Female | Male | Recombination rate | Sex-average | Female | Male | Recombination rate | |||
(Mb) | (cM) | (cM) | (cM/Mb) | (cM) | (cM) | (cM/Mb) | |||
GGA1 | 200.9 | 504.0 | 471.0 | 541.6 | 2.5 | 387.1 | 351.8 | 428.0 | 1.9 |
GGA2 | 154.8 | 341.4 | 321.1 | 363.5 | 2.2 | 267.7 | 245.9 | 289.4 | 1.7 |
GGA3 | 113.6 | 288.8 | 269.5 | 309.2 | 2.5 | 224.8 | 215.6 | 236.4 | 2.0 |
GGA4 | 94.2 | 237.6 | 227.5 | 247.3 | 2.5 | 183.7 | 171.5 | 196.5 | 1.9 |
GGA5 | 62.2 | 176.8 | 175.7 | 178.5 | 2.8 | 148.6 | 149.1 | 149.6 | 2.4 |
GGA6 | 37.3 | 110.5 | 97.9 | 122.2 | 3.0 | 89.8 | 81.6 | 97.3 | 2.4 |
GGA7 | 38.3 | 117.1 | 119.7 | 118.3 | 3.1 | 99.5 | 93.7 | 105.2 | 2.6 |
GGA8 | 30.6 | 107.5 | 103.1 | 111.3 | 3.5 | 94.0 | 91.9 | 95.6 | 3.1 |
GGA9 | 25.5 | 97.1 | 99.0 | 95.9 | 3.8 | 85.2 | 81.5 | 88.8 | 3.3 |
GGA10 | 22.5 | 94.5 | 91.6 | 97.9 | 4.2 | 75.4 | 73.7 | 76.3 | 3.4 |
GGA11 | 21.9 | 87.1 | 86.8 | 87.7 | 4.0 | 58.8 | 58.4 | 59.6 | 2.7 |
GGA12 | 20.5 | 89.0 | 90.3 | 88.5 | 4.3 | 64.3 | 62.6 | 66.6 | 3.1 |
GGA13 | 18.9 | 74.1 | 76.7 | 71.6 | 3.9 | 58.1 | 58.0 | 58.2 | 3.1 |
GGA14 | 15.8 | 75.2 | 74.9 | 75.4 | 4.8 | 64.2 | 66.5 | 61.6 | 4.1 |
GGA15 | 13.0 | 59.7 | 57.0 | 62.0 | 4.6 | 52.3 | 51.9 | 52.4 | 4.0 |
GGA16 | 0.4 | 55.4 | 59.1 | 53.1 | n.d.2 | 0.3 | 0.5 | 0.0 | n.d.2 |
GGA17 | 11.2 | 54.6 | 52.4 | 57.3 | 4.9 | 50.2 | 51.6 | 49.3 | 4.5 |
GGA18 | 10.9 | 58.1 | 56.5 | 60.1 | 5.3 | 49.2 | 47.8 | 50.6 | 4.5 |
GGA19 | 9.9 | 49.7 | 52.2 | 47.9 | 5.0 | 52.7 | 53.4 | 52.5 | 5.3 |
GGA20 | 13.9 | 58.4 | 55.8 | 60.5 | 4.2 | 53.9 | 54.9 | 52.9 | 3.9 |
GGA21 | 6.9 | 58.9 | 56.0 | 61.8 | 8.5 | 56.2 | 57.2 | 54.9 | 8.1 |
GGA22 | 3.9 | 51.6 | 55.4 | 46.5 | 13.1 | 53.6 | 56.0 | 51.9 | 13.6 |
GGA23 | 6.0 | 48.4 | 49.1 | 47.8 | 8.0 | 53.1 | 52.2 | 53.9 | 8.8 |
GGA24 | 6.4 | 51.2 | 49.0 | 53.7 | 8.0 | 53.7 | 54.5 | 52.1 | 8.4 |
GGA25 | 2.0 | 57.5 | 56.7 | 58.5 | n.d.2 | 57.3 | 54.1 | 59.4 | n.d.2 |
GGA26 | 5.1 | 50.6 | 50.1 | 50.5 | 9.9 | 52.6 | 51.7 | 53.5 | 10.3 |
GGA27 | 4.7 | 49.0 | 47.0 | 51.3 | 10.4 | 51.5 | 52.1 | 51.3 | 10.9 |
GGA28 | 4.5 | 52.9 | 56.8 | 50.9 | 11.7 | 53.7 | 52.0 | 55.2 | 11.9 |
LGE22 | 0.9 | 55.6 | 48.5 | 62.0 | n.d.2 | 46.9 | 54.4 | 46.0 | n.d.2 |
LGE64 | 0.017 | 23.5 | 27.4 | 22.8 | n.d.2 | 4.1 | 4.1 | 3.8 | n.d.2 |
GGZ | 74.6 | 262.8 | - | 262.8 | 3.5 | 169.8 | - | 169.8 | 2.3 |
Total autosomal | 956.9 | 3,235.8 | 3,133.8 | 3,355.6 | 3.4 | 2,642.5 | 2,550.2 | 2,748.8 | 2.8 |
Total length | 1,031.5 | 3,498.6 | 3,133.8 | 3,618.4 | 3.4 | 2,812.3 | 2,550.2 | 2,918.6 | 2.7 |