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Table 5 Associations between SNP alleles and dark versus light hair colour in 378 Danes.

From: Genetic determinants of hair and eye colours in the Scottish and Danish populations

Gene Chr. Positiona SNP Min.allele MAFb p-value ORe Hair colour
MATP 5 Exon 5 L374F rs16891982 C 0.02 0.005 7.0 Dark
   Exon 3
K272E
rs26722 A 0.02 0.07   Dark
HERC2 15 Int 12 rs916977c T 0.07 8.3 × 19-5 d 3.7 Dark
   3'UTR rs1129038c C 0.11 2.0 × 10-6 d 3.5 Dark
   Exon 78
Q3989Q
rs11636232 T 0.46 0.098   
   Int 44 rs2238289 G 0.07 2.2 × 10-5 d 4.0 Dark
   Int 56 rs7170852 A 0.09 1.7 × 10-5 d 3.5 Dark
OCA2 15 Exon 9
W305R
rs1800401 T 0.04 0.75   
   Exon 13 Q419R rs1800407 A 0.04 0.31   
MC1R 16 5' UTR rs3212359 A 0.34 0.17   
   5' UTR rs3212361 T 0.27 0.055   
   V60L rs1805005 A 0.12 0.20   
   V92M rs2228479 A 0.07 0.22   
   R151C rs1805007 T 0.09 0.70   
   R160W rs1805008 T 0.08 0.055   
   R163Q rs885479 T 0.04 1.0   
   T314T rs2228478c G 0.09 1.0   
  1. a: Intron (Int), Exon or Untranslated region (UTR) position in the gene
  2. b: Minor allele frequency (MAF)
  3. c: alleles slightly out of Hardy Weinberg Equilibrium
  4. d: Significant using Bonferroni correction. Other p-values were corrected by empirical permutation
  5. e: Odds ratios are only shown for statistically significant associations