Table 4 Typing of Sox6 genes and alleles by sequence polymorphisms in rainbow trout crosses.
From: Mapping of five candidate sex-determining loci in rainbow trout (Oncorhynchus mykiss)
Gene | Accession numbers | parent | Site of polymorphism | Polymorphism | Method of genotyping | Size of marker |
|---|---|---|---|---|---|---|
Sox6ii | EU848567 | Arlee | 725–729 of fourth intron | G(G) ACC | PCR-RFLP Ava II | 984 bp |
Sox6i | EU848564 | OSU | 806–810 of fourth intron | G(G) ACC | 1067 bp | |
Sox6ii | EU848565 | OSU | 725 of fourth intron | G(A) ACC | 984 bp | |
Sox6i | EU848568 | HC | Size of fourth intron | 30 bp expansion | Size polymorphism | 1097 bp |
Sox6ii | EU848569 | HC | No polymorphism with Sox6ii of OSU | 984 bp |