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Table 2 Contrasts (standard errors ±) for survival and fertilization rates analyzed for 14 SNP upstream of STAT5A, in STAT5A, and in STAT.

From: Monoallelic maternal expression of STAT5A affects embryonic survival in cattle

SNP/Genotypes Difference in survival rate P value Differenc in fertilization rate P value
SNP137887 (upstream STAT5A)     
AA vs. AG -0.029 ± 0.030 0.3429 -0.035 ± 0.025 0.1715
AA vs. GG 0.009 ± 0.053 0.8552 -0.024 ± 0.044 0.5929
AG vs. GG 0.039 ± 0.053 0.4674 0.011 ± 0.045 0.7965
SNP138012 (upstream STAT5A)     
GG vs. GT -0.003 ± 0.032 0.9234 -0.044 ± 0.027 0.0990
GG vs. TT -0.056 ± 0.045 0.2150 -0.038 ± 0.038 0.3113
GT vs. TT -0.053 ± 0.044 0.2297 0.005 ± 0.037 0.8739
SNP138242 (upstream STAT5A)     
CC vs. CT -0.027 ± 0.031 0.3798 -0.054 ± 0.024 0.0291
CC vs. TT -0.051 ± 0.048 0.2824 -0.053 ± 0.038 0.1654
CT vs. TT -0.024 ± 0.048 0.6150 0.001 ± 0.038 0.9709
SNP138299 (upstream STAT5A)     
AA vs. AG 0.055 ± 0.039 0.1591 0.037 ± 0.031 0.2429
AA vs. GG 0.070 ± 0.042 0.0975 0.062 ± 0.033 0.0678
AG vs. GG 0.014 ± 0.033 0.6640 0.025 ± 0.026 0.3458
SNP138337 (upstream STAT5A)     
AA vs. AG -0.034 ± 0.031 0.2655 -0.057 ± 0.024 0.0213
AA vs. GG -0.058 ± 0.047 0.2213 -0.060 ± 0.037 0.1091
AG vs. GG -0.023 ± 0.047 0.6217 -0.003 ± 0.037 0.9328
SNP138596 (upstream STAT5A)     
CC vs. GC -0.187 ± 0.250 0.4559 -0.204 ± 0.199 0.3085
CC vs. GG -0.1767 ± 0.248 0.4778 -0.172 ± 0.198 0.3868
GC vs. GG 0.010 ± 0.036 0.7822 0.031 ± 0.029 0.2788
SNP138653 (upstream STAT5A)     
CC vs. GC 0.077 ± 0.040 0.0586 0.036 ± 0.032 0.2525
CC vs. GG 0.079 ± 0.044 0.0716 0.046 ± 0.034 0.1833
GC vs. GG 0.002 ± 0.033 0.9490 0.009 ± 0.026 0.7155
SNP153137 (STAT5A)     
CC vs. GC 0.067 ± 0.036 0.0682 0.021 ± 0.029 0.4771
CC vs. GG 0.128 ± 0.042 0.0027 0.077 ± 0.034 0.0258
GC vs. GG 0.061 ± 0.032 0.060 0.056 ± 0.026 0.035
SNP153827 (STAT5A)     
AA vs. AC 0.008 ± 0.037 0.8243 -0.036 ± 0.029 0.2260
AA vs. CC -0.069 ± 0.048 0.1501 -0.072 ± 0.037 0.0521
AC vs. CC -0.078 ± 0.044 0.0792 -0.036 ± 0.034 0.2876
SNP153866 (STAT5A)     
CC vs. CT 0.075 ± 0.042 0.0809 0.058 ± 0.032 0.0744
CC vs. TT 0.078 ± 0.047 0.0996 0.079 ± 0.036 0.0292
CT vs. TT 0.003 ± 0.036 0.9241 0.020 ± 0.027 0.4607
SNP154186 (STAT5A)     
AA vs. AG -0.022 ± 0.035 0.5232 -0.028 ± 0.027 0.3007
AA vs. GG -0.092 ± 0.045 0.0417 -0.078 ± 0.031 0.0250
AG vs. GG -0.069 ± 0.040 0.0896 -0.049 ± 0.031 0.1160
SNP154261 (STAT5A)     
AA vs. AG 0.165 ± 0.103 0.1113 0.078 ± 0.080 0.3266
AA vs. GG 0.140 ± 0.097 0.1504 0.063 ± 0.075 0.4065
AG vs. GG -0.024 ± 0.042 0.5579 -0.016 ± 0.032 0.6231
SNP171005 (STAT3)     
GG vs. GT 0.009 ± 0.039 0.8024 0.023 ± 0.030 0.4411
GG vs. TT 0.061 ± 0.036 0.0877 0.039 ± 0.028 0.1696
GT vs. TT 0.051 ± 0.032 0.1069 0.015 ± 0.025 0.5467
SNP177338 (STAT3)     
CC vs. CT -0.011 ± 0.040 0.7804 -0.001 ± 0.031 0.9891
CC vs. TT -0.015 ± 0.044 0.7231 0.05 ± 0.034 0.1408
CT vs. TT -0.004 ± 0.036 0.8981 0.051 ± 0.028 0.0682