From: Bio-informatic analysis of CRISPR protospacer adjacent motifs (PAMs) in T4 genome
CRISPR-Cas system types | From Organism | PAM Sequence (5' to 3') | Reference |
---|---|---|---|
II-A I-C IV | Streptococcus pyogenes S. agalactiae Listeria monocytogenes Francisella novicida (FnCas9) | NGG NAG (A/T)GG | |
NGG | [18] | ||
II-A | Staphylococcus aureus | NGRRT NGRRN NNGRRT TTGGGT | |
II- C | Neisseria meningitidis | NNNNGATT | [16] |
II-A | Streptococcus thermophilus | NNAGAAW NGGNG | |
V-A II-A | Lachnospiraceae bacterium | TTTV TCTA | [24] |
V-A Cas12a (AsCas12a, AsCpf1) | Acidaminococcus sp. | GTTV GCTV TATA (eng. Cpf1) TTTV | |
I-E | Escherichia coli | C(T/A)T | |
I-E | Escherichia coli | 5’-ATG-3’ 5’-AAG-3’ Its complement 5′-CTT-3′ | |
I-E | Escherichia coli | AWG | [30] |
I-A | S. solfataricus | TCN CCN |